Difference between revisions of "TSS:Hg 103033.1"
From referenceTSS
| (3 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
|SARD= | |SARD= | ||
|SDH= | |SDH= | ||
| − | |all_trans= | + | |all_trans=HGNC:10536 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=404 | |distance=404 | ||
| − | |distance_to_tss= | + | |distance_to_tss=24846 |
|end=133713512 | |end=133713512 | ||
| + | |end_of_center_position=133713507 | ||
|entrez_id=1757 | |entrez_id=1757 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=BPR-2 | + | |gene_alias=BPR-2{{!}}DMGDHL1{{!}}SAR{{!}}SARD{{!}}SDH |
|gene_description=sarcosine dehydrogenase | |gene_description=sarcosine dehydrogenase | ||
|gene_id=1757 | |gene_id=1757 | ||
| Line 25: | Line 26: | ||
|nearest_refseq=NM_007101 | |nearest_refseq=NM_007101 | ||
|nearest_unigene=Hs.198003 | |nearest_unigene=Hs.198003 | ||
| − | |num_trans= | + | |num_trans=1757 |
|species=human | |species=human | ||
|start=133713500 | |start=133713500 | ||
| + | |start_of_center_position=133713506 | ||
|strand=- | |strand=- | ||
|transcript_name=BC033217 | |transcript_name=BC033217 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_103033.1 | |tss_id=hg_103033.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q05BT1 | |uniprot_id=Q05BT1 | ||
}} | }} | ||
Latest revision as of 18:40, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133713506 |
|---|---|
| End of the center position in the TSS region: | 133713507 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC033217 |
|---|---|
| Distance: | 404 |
| Num_trans: | 1757 |
| All_trans: | HGNC:10536 |
TATA-Box annotation
| Distance to TSS: | 24846 |
|---|---|
| Nearest PromoterID: | NM_001134707 |
| Entrez ID: | 1757 |
| Nearest Unigene: | Hs.198003 |
| Nearest Refseq: | NM_007101 |
| Nearest Ensembl: | ENSG00000123453 |
| Gene Name: | sarcosine dehydrogenase |
| Gene Alias: | BPR-2|DMGDHL1|SAR|SARD|SDH |
| Gene Description: | sarcosine dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
