Difference between revisions of "TSS:Hg 103121.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 5: | Line 5: | ||
|NAC-2= | |NAC-2= | ||
|RBB= | |RBB= | ||
| − | |all_trans= | + | |all_trans=HGNC:23846 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=14 |
| − | |distance_to_tss=- | + | |distance_to_tss=-26 |
|end=136095327 | |end=136095327 | ||
| + | |end_of_center_position=136095315 | ||
|entrez_id=138151 | |entrez_id=138151 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=BEND9 | + | |gene_alias=BEND9{{!}}BTBD14{{!}}BTBD14A{{!}}BTBD31{{!}}NAC-2{{!}}RBB |
|gene_description=NACC family member 2 | |gene_description=NACC family member 2 | ||
|gene_id=138151 | |gene_id=138151 | ||
| Line 26: | Line 27: | ||
|nearest_refseq=NM_144653 | |nearest_refseq=NM_144653 | ||
|nearest_unigene=Hs.112895 | |nearest_unigene=Hs.112895 | ||
| − | |num_trans= | + | |num_trans=138151 |
|species=human | |species=human | ||
|start=136095302 | |start=136095302 | ||
| + | |start_of_center_position=136095314 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000277554 | + | |transcript_name=ENST00000277554.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103121.1 | |tss_id=hg_103121.1 | ||
Latest revision as of 18:42, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136095314 |
|---|---|
| End of the center position in the TSS region: | 136095315 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000277554.4 |
|---|---|
| Distance: | 14 |
| Num_trans: | 138151 |
| All_trans: | HGNC:23846 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_144653 |
| Entrez ID: | 138151 |
| Nearest Unigene: | Hs.112895 |
| Nearest Refseq: | NM_144653 |
| Nearest Ensembl: | ENSG00000148411 |
| Gene Name: | NACC family member 2 |
| Gene Alias: | BEND9|BTBD14|BTBD14A|BTBD31|NAC-2|RBB |
| Gene Description: | NACC family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
