Difference between revisions of "TSS:Hg 103133.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=2454 |
|end=136199228 | |end=136199228 | ||
| + | |end_of_center_position=136199221 | ||
|entrez_id=8022 | |entrez_id=8022 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=CPHD3 | + | |gene_alias=CPHD3{{!}}LIM3{{!}}M2-LHX3 |
|gene_description=LIM homeobox 3 | |gene_description=LIM homeobox 3 | ||
|gene_name=LHX3 | |gene_name=LHX3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000107187 | |nearest_ensembl=ENSG00000107187 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363746 |
|nearest_refseq=NM_014564 | |nearest_refseq=NM_014564 | ||
|nearest_unigene=Hs.148427 | |nearest_unigene=Hs.148427 | ||
| Line 20: | Line 21: | ||
|species=human | |species=human | ||
|start=136199212 | |start=136199212 | ||
| + | |start_of_center_position=136199220 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136199220 |
|---|---|
| End of the center position in the TSS region: | 136199221 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2454 |
|---|---|
| Nearest PromoterID: | NM_001363746 |
| Entrez ID: | 8022 |
| Nearest Unigene: | Hs.148427 |
| Nearest Refseq: | NM_014564 |
| Nearest Ensembl: | ENSG00000107187 |
| Gene Name: | LHX3 |
| Gene Alias: | CPHD3|LIM3|M2-LHX3 |
| Gene Description: | LIM homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
