Difference between revisions of "TSS:Hg 10315.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF357356:27 MA592933:27 LF357357:153 MA592934:153 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=27 |
| − | |distance_to_tss= | + | |distance_to_tss=554 |
|end=11736700 | |end=11736700 | ||
| + | |end_of_center_position=11736690 | ||
|entrez_id=57085 | |entrez_id=57085 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NM_020350 | |nearest_refseq=NM_020350 | ||
|nearest_unigene=Hs.464438 | |nearest_unigene=Hs.464438 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=11736679 | |start=11736679 | ||
| + | |start_of_center_position=11736689 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(CTTTATAAAACC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=LF357356 MA592933 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10315.1 | |tss_id=hg_10315.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:20, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 11736689 |
|---|---|
| End of the center position in the TSS region: | 11736690 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF357356 MA592933 |
|---|---|
| Distance: | 27 |
| Num_trans: | 4 |
| All_trans: | LF357356:27 MA592933:27 LF357357:153 MA592934:153 |
TATA-Box annotation
| Distance to TSS: | 554 |
|---|---|
| Nearest PromoterID: | NM_020350 |
| Entrez ID: | 57085 |
| Nearest Unigene: | Hs.464438 |
| Nearest Refseq: | NM_020350 |
| Nearest Ensembl: | ENSG00000177674 |
| Gene Name: | AGTRAP |
| Gene Alias: | ATRAP |
| Gene Description: | angiotensin II receptor associated protein |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CTTTATAAAACC,+,0.00) |
