Difference between revisions of "TSS:Hg 103190.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:325 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=6067 | |distance_to_tss=6067 | ||
|end=136676670 | |end=136676670 | ||
| + | |end_of_center_position=136676669 | ||
|entrez_id=406913 | |entrez_id=406913 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=MIRN126 | + | |gene_alias=MIRN126{{!}}miRNA126{{!}}mir-126 |
|gene_description=microRNA 126 | |gene_description=microRNA 126 | ||
|gene_id=10555 | |gene_id=10555 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NR_029695 | |nearest_refseq=NR_029695 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=10555 |
|species=human | |species=human | ||
|start=136676667 | |start=136676667 | ||
| + | |start_of_center_position=136676668 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=43(CCTTTTAAGAAG,+,0.00) |
|transcript_name=BC007269 | |transcript_name=BC007269 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 18:43, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136676668 |
|---|---|
| End of the center position in the TSS region: | 136676669 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC007269 |
|---|---|
| Distance: | -459 |
| Num_trans: | 10555 |
| All_trans: | HGNC:325 |
TATA-Box annotation
| Distance to TSS: | 6067 |
|---|---|
| Nearest PromoterID: | NR_029695 |
| Entrez ID: | 406913 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029695 |
| Nearest Ensembl: | ENSG00000199161 |
| Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Alias: | MIRN126|miRNA126|mir-126 |
| Gene Description: | microRNA 126 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(CCTTTTAAGAAG,+,0.00) |
