Difference between revisions of "TSS:Hg 103215.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans= | + | |all_trans=HGNC:27038 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
|end=136758309 | |end=136758309 | ||
| + | |end_of_center_position=136758306 | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_178469 | |nearest_refseq=NM_178469 | ||
|nearest_unigene=Hs.323991 | |nearest_unigene=Hs.323991 | ||
| − | |num_trans= | + | |num_trans=138307 |
|species=human | |species=human | ||
|start=136758302 | |start=136758302 | ||
| + | |start_of_center_position=136758305 | ||
|strand=- | |strand=- | ||
|transcript_name=BC042109 | |transcript_name=BC042109 | ||
Latest revision as of 18:44, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136758305 |
|---|---|
| End of the center position in the TSS region: | 136758306 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC042109 |
|---|---|
| Distance: | 15 |
| Num_trans: | 138307 |
| All_trans: | HGNC:27038 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
