Difference between revisions of "TSS:Hg 10003.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.16 |distance_to_tss=55 |entrez_id=23463 |gc_percent=0.791045 |gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT |gene_description=isoprenylcysteine c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MST098= | ||
| + | |MSTP098= | ||
| + | |PCCMT= | ||
| + | |PCMT= | ||
| + | |PPMT= | ||
| + | |all_trans=HGNC:5350 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=35 | ||
| + | |end=6235943 | ||
| + | |end_of_center_position=6235930 | ||
|entrez_id=23463 | |entrez_id=23463 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=HSTE14 | + | |gene_alias=HSTE14{{!}}MST098{{!}}MSTP098{{!}}PCCMT{{!}}PCMT{{!}}PPMT |
|gene_description=isoprenylcysteine carboxyl methyltransferase | |gene_description=isoprenylcysteine carboxyl methyltransferase | ||
| − | |gene_name=ICMT | + | |gene_id=23463 |
| + | |gene_name=isoprenylcysteine carboxyl methyltransferase | ||
| + | |gene_source=HGNC:5350 | ||
| + | |gene_symbol=ICMT | ||
| + | |gene_synonyms=HSTE14 PCCMT PPMT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5350 | ||
|nearest_ensembl=ENSG00000116237 | |nearest_ensembl=ENSG00000116237 | ||
|nearest_promoter_id=NM_012405 | |nearest_promoter_id=NM_012405 | ||
|nearest_refseq=NM_012405 | |nearest_refseq=NM_012405 | ||
|nearest_unigene=Hs.515688 | |nearest_unigene=Hs.515688 | ||
| + | |num_trans=23463 | ||
| + | |species=human | ||
| + | |start=6235915 | ||
| + | |start_of_center_position=6235929 | ||
| + | |strand=- | ||
| + | |transcript_name=BC028168 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10003.1 | |tss_id=hg_10003.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:34, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6235929 |
|---|---|
| End of the center position in the TSS region: | 6235930 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC028168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23463 |
| All_trans: | HGNC:5350 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_012405 |
| Entrez ID: | 23463 |
| Nearest Unigene: | Hs.515688 |
| Nearest Refseq: | NM_012405 |
| Nearest Ensembl: | ENSG00000116237 |
| Gene Name: | isoprenylcysteine carboxyl methyltransferase |
| Gene Alias: | HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT |
| Gene Description: | isoprenylcysteine carboxyl methyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
