Difference between revisions of "TSS:Hg 103600.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|AKRDC1= | |AKRDC1= | ||
|LoopADR= | |LoopADR= | ||
| − | |all_trans= | + | |all_trans=HGNC:23437 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 8: | Line 8: | ||
|distance_to_tss=-20 | |distance_to_tss=-20 | ||
|end=4826162 | |end=4826162 | ||
| + | |end_of_center_position=4826157 | ||
|entrez_id=83592 | |entrez_id=83592 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=AKR1CL2 | + | |gene_alias=AKR1CL2{{!}}AKRDC1{{!}}LoopADR{{!}}TAKR{{!}}hTSP{{!}}htAKR |
|gene_description=aldo-keto reductase family 1 member E2 | |gene_description=aldo-keto reductase family 1 member E2 | ||
|gene_id=83592 | |gene_id=83592 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member E2 |
|gene_source=HGNC:23437 | |gene_source=HGNC:23437 | ||
|gene_symbol=AKR1E2 | |gene_symbol=AKR1E2 | ||
| − | |gene_synonyms=MGC10612 | + | |gene_synonyms=HTSP1 MGC10612 htAKR |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hTSP= | |hTSP= | ||
| Line 22: | Line 23: | ||
|htAKR= | |htAKR= | ||
|nearest_ensembl=ENSG00000165568 | |nearest_ensembl=ENSG00000165568 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001271025 |
|nearest_refseq=NM_031436 | |nearest_refseq=NM_031436 | ||
|nearest_unigene=Hs.657944 | |nearest_unigene=Hs.657944 | ||
| − | |num_trans= | + | |num_trans=83592 |
|species=human | |species=human | ||
|start=4826151 | |start=4826151 | ||
| + | |start_of_center_position=4826156 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000474119.5 | + | |transcript_name=ENST00000474119.5 AK074211 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103600.1 | |tss_id=hg_103600.1 | ||
Latest revision as of 18:52, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 4826156 |
|---|---|
| End of the center position in the TSS region: | 4826157 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000474119.5 AK074211 |
|---|---|
| Distance: | 15 |
| Num_trans: | 83592 |
| All_trans: | HGNC:23437 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_001271025 |
| Entrez ID: | 83592 |
| Nearest Unigene: | Hs.657944 |
| Nearest Refseq: | NM_031436 |
| Nearest Ensembl: | ENSG00000165568 |
| Gene Name: | aldo-keto reductase family 1 member E2 |
| Gene Alias: | AKR1CL2|AKRDC1|LoopADR|TAKR|hTSP|htAKR |
| Gene Description: | aldo-keto reductase family 1 member E2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
