Difference between revisions of "TSS:Hg 103621.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 9: | Line 9: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-610 |
|end=5093818 | |end=5093818 | ||
| + | |end_of_center_position=5093804 | ||
|entrez_id=8644 | |entrez_id=8644 | ||
|gc_percent=0.283582 | |gc_percent=0.283582 | ||
| − | |gene_alias=DD3 | + | |gene_alias=DD3{{!}}DDX{{!}}HA1753{{!}}HAKRB{{!}}HAKRe{{!}}HSD17B5{{!}}PGFS{{!}}hluPGFS |
|gene_description=aldo-keto reductase family 1 member C3 | |gene_description=aldo-keto reductase family 1 member C3 | ||
|gene_id=8644 | |gene_id=8644 | ||
| − | |gene_name= | + | |gene_name=AKR1C3 |
|gene_source=HGNC:386 | |gene_source=HGNC:386 | ||
|gene_symbol=AKR1C3 | |gene_symbol=AKR1C3 | ||
| Line 25: | Line 26: | ||
|hluPGFS= | |hluPGFS= | ||
|nearest_ensembl=ENSG00000196139 | |nearest_ensembl=ENSG00000196139 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_003739 |
|nearest_refseq=NM_003739 | |nearest_refseq=NM_003739 | ||
|nearest_unigene=Hs.78183 | |nearest_unigene=Hs.78183 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=5093789 | |start=5093789 | ||
| + | |start_of_center_position=5093803 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103621.1 | |tss_id=hg_103621.1 | ||
Latest revision as of 17:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5093803 |
|---|---|
| End of the center position in the TSS region: | 5093804 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000380554.4:0 uc001ihu.4:0 |
TATA-Box annotation
| Distance to TSS: | -610 |
|---|---|
| Nearest PromoterID: | NM_003739 |
| Entrez ID: | 8644 |
| Nearest Unigene: | Hs.78183 |
| Nearest Refseq: | NM_003739 |
| Nearest Ensembl: | ENSG00000196139 |
| Gene Name: | AKR1C3 |
| Gene Alias: | DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS |
| Gene Description: | aldo-keto reductase family 1 member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.283582 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
