Difference between revisions of "TSS:Hg 103910.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17702 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-26191 | |distance_to_tss=-26191 | ||
|end=12157026 | |end=12157026 | ||
| + | |end_of_center_position=12157007 | ||
|entrez_id=100616488 | |entrez_id=100616488 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| Line 11: | Line 12: | ||
|gene_description=microRNA 548ak | |gene_description=microRNA 548ak | ||
|gene_id=55176 | |gene_id=55176 | ||
| − | |gene_name= | + | |gene_name=SEC61 translocon subunit alpha 2 |
|gene_source=HGNC:17702 | |gene_source=HGNC:17702 | ||
|gene_symbol=SEC61A2 | |gene_symbol=SEC61A2 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_039699 | |nearest_refseq=NR_039699 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=55176 |
|species=human | |species=human | ||
|start=12156987 | |start=12156987 | ||
| + | |start_of_center_position=12157006 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000466451 | + | |transcript_name=ENST00000466451.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103910.1 | |tss_id=hg_103910.1 | ||
Latest revision as of 18:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12157006 |
|---|---|
| End of the center position in the TSS region: | 12157007 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000466451.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55176 |
| All_trans: | HGNC:17702 |
TATA-Box annotation
| Distance to TSS: | -26191 |
|---|---|
| Nearest PromoterID: | NR_039699 |
| Entrez ID: | 100616488 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039699 |
| Nearest Ensembl: | ENSG00000265653 |
| Gene Name: | SEC61 translocon subunit alpha 2 |
| Gene Alias: | - |
| Gene Description: | microRNA 548ak |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
