Difference between revisions of "TSS:Hg 103941.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 8: | Line 8: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=17301 |
|end=13117465 | |end=13117465 | ||
| + | |end_of_center_position=13117464 | ||
|entrez_id=10133 | |entrez_id=10133 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=ALS12 | + | |gene_alias=ALS12{{!}}FIP2{{!}}GLC1E{{!}}HIP7{{!}}HYPL{{!}}NRP{{!}}TFIIIA-INTP |
|gene_description=optineurin | |gene_description=optineurin | ||
|gene_name=OPTN | |gene_name=OPTN | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000123240 | |nearest_ensembl=ENSG00000123240 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001008212 |
|nearest_refseq=NM_021980 | |nearest_refseq=NM_021980 | ||
|nearest_unigene=Hs.332706 | |nearest_unigene=Hs.332706 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=13117462 | |start=13117462 | ||
| + | |start_of_center_position=13117463 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13117463 |
|---|---|
| End of the center position in the TSS region: | 13117464 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 17301 |
|---|---|
| Nearest PromoterID: | NM_001008212 |
| Entrez ID: | 10133 |
| Nearest Unigene: | Hs.332706 |
| Nearest Refseq: | NM_021980 |
| Nearest Ensembl: | ENSG00000123240 |
| Gene Name: | OPTN |
| Gene Alias: | ALS12|FIP2|GLC1E|HIP7|HYPL|NRP|TFIIIA-INTP |
| Gene Description: | optineurin |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
