Difference between revisions of "TSS:Hg 103951.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17351 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=13587012 | |end=13587012 | ||
| + | |end_of_center_position=13586973 | ||
|entrez_id=8559 | |entrez_id=8559 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=PRP18 | + | |gene_alias=PRP18{{!}}hPrp18 |
|gene_description=pre-mRNA processing factor 18 | |gene_description=pre-mRNA processing factor 18 | ||
|gene_id=8559 | |gene_id=8559 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_003675 | |nearest_refseq=NM_003675 | ||
|nearest_unigene=Hs.660649 | |nearest_unigene=Hs.660649 | ||
| − | |num_trans= | + | |num_trans=8559 |
|species=human | |species=human | ||
|start=13586933 | |start=13586933 | ||
| + | |start_of_center_position=13586972 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000417658.5 ENST00000320054.4 | + | |transcript_name=ENST00000417658.5 ENST00000378572.8 ENST00000320054.4 AK314814 BC002572 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103951.1 | |tss_id=hg_103951.1 | ||
Latest revision as of 18:59, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13586972 |
|---|---|
| End of the center position in the TSS region: | 13586973 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000417658.5 ENST00000378572.8 ENST00000320054.4 AK314814 BC002572 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8559 |
| All_trans: | HGNC:17351 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_003675 |
| Entrez ID: | 8559 |
| Nearest Unigene: | Hs.660649 |
| Nearest Refseq: | NM_003675 |
| Nearest Ensembl: | ENSG00000165630 |
| Gene Name: | pre-mRNA processing factor 18 |
| Gene Alias: | PRP18|hPrp18 |
| Gene Description: | pre-mRNA processing factor 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
