Difference between revisions of "TSS:Hg 102406.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |GL012= | ||
| + | |NCRNA00287= | ||
| + | |all_trans=HGNC:16462 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=135 | ||
|distance_to_tss=-21173 | |distance_to_tss=-21173 | ||
| + | |end=123136662 | ||
| + | |end_of_center_position=123136650 | ||
|entrez_id=81571 | |entrez_id=81571 | ||
|gc_percent=0.353234 | |gc_percent=0.353234 | ||
| − | |gene_alias=C9orf45 | + | |gene_alias=C9orf45{{!}}GL012{{!}}NCRNA00287 |
|gene_description=MIR600 host gene | |gene_description=MIR600 host gene | ||
| − | |gene_name= | + | |gene_id=55342 |
| + | |gene_name=spermatid perinuclear RNA binding protein | ||
| + | |gene_source=HGNC:16462 | ||
| + | |gene_symbol=STRBP | ||
| + | |gene_synonyms=FLJ11307 SPNR | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:16462 | ||
|nearest_ensembl=ENSG00000236901 | |nearest_ensembl=ENSG00000236901 | ||
|nearest_promoter_id=NR_026677 | |nearest_promoter_id=NR_026677 | ||
|nearest_refseq=NM_030814 | |nearest_refseq=NM_030814 | ||
|nearest_unigene=Hs.708072 | |nearest_unigene=Hs.708072 | ||
| + | |num_trans=55342 | ||
| + | |species=human | ||
| + | |start=123136637 | ||
| + | |start_of_center_position=123136649 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000492885.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102406.1 | |tss_id=hg_102406.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:26, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 123136649 |
|---|---|
| End of the center position in the TSS region: | 123136650 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000492885.1 |
|---|---|
| Distance: | 135 |
| Num_trans: | 55342 |
| All_trans: | HGNC:16462 |
TATA-Box annotation
| Distance to TSS: | -21173 |
|---|---|
| Nearest PromoterID: | NR_026677 |
| Entrez ID: | 81571 |
| Nearest Unigene: | Hs.708072 |
| Nearest Refseq: | NM_030814 |
| Nearest Ensembl: | ENSG00000236901 |
| Gene Name: | spermatid perinuclear RNA binding protein |
| Gene Alias: | C9orf45|GL012|NCRNA00287 |
| Gene Description: | MIR600 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.353234 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
