Difference between revisions of "TSS:Hg 104089.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:44880 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=65 | |distance_to_tss=65 | ||
|end=17387004 | |end=17387004 | ||
| + | |end_of_center_position=17387001 | ||
|entrez_id=100128098 | |entrez_id=100128098 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| Line 14: | Line 15: | ||
|gene_source=HGNC:44880 | |gene_source=HGNC:44880 | ||
|gene_symbol=ST8SIA6-AS1 | |gene_symbol=ST8SIA6-AS1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=APAL |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:44880 | |hgnc_mgi_id=HGNC:44880 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_034129 | |nearest_refseq=NR_034129 | ||
|nearest_unigene=Hs.530588 | |nearest_unigene=Hs.530588 | ||
| − | |num_trans= | + | |num_trans=100128098 |
|species=human | |species=human | ||
|start=17386997 | |start=17386997 | ||
| + | |start_of_center_position=17387000 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000451225.2 | + | |transcript_name=ENST00000451225.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104089.1 | |tss_id=hg_104089.1 | ||
Latest revision as of 19:02, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17387000 |
|---|---|
| End of the center position in the TSS region: | 17387001 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000451225.2 |
|---|---|
| Distance: | -4 |
| Num_trans: | 100128098 |
| All_trans: | HGNC:44880 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NR_034129 |
| Entrez ID: | 100128098 |
| Nearest Unigene: | Hs.530588 |
| Nearest Refseq: | NR_034129 |
| Nearest Ensembl: | ENSG00000204832 |
| Gene Name: | ST8SIA6 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | ST8SIA6 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
