Difference between revisions of "TSS:Hg 104171.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:21013 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-182 | |distance=-182 | ||
| − | |distance_to_tss= | + | |distance_to_tss=196 |
|end=19816631 | |end=19816631 | ||
| + | |end_of_center_position=19816628 | ||
|entrez_id=84898 | |entrez_id=84898 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:21013 | |hgnc_mgi_id=HGNC:21013 | ||
|nearest_ensembl=ENSG00000120594 | |nearest_ensembl=ENSG00000120594 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282736 |
|nearest_refseq=NM_032812 | |nearest_refseq=NM_032812 | ||
|nearest_unigene=Hs.99472 | |nearest_unigene=Hs.99472 | ||
| − | |num_trans= | + | |num_trans=84898 |
|species=human | |species=human | ||
|start=19816624 | |start=19816624 | ||
| + | |start_of_center_position=19816627 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AY358486 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104171.1 | |tss_id=hg_104171.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:04, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19816627 |
|---|---|
| End of the center position in the TSS region: | 19816628 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY358486 |
|---|---|
| Distance: | -182 |
| Num_trans: | 84898 |
| All_trans: | HGNC:21013 |
TATA-Box annotation
| Distance to TSS: | 196 |
|---|---|
| Nearest PromoterID: | NM_001282736 |
| Entrez ID: | 84898 |
| Nearest Unigene: | Hs.99472 |
| Nearest Refseq: | NM_032812 |
| Nearest Ensembl: | ENSG00000120594 |
| Gene Name: | plexin domain containing 2 |
| Gene Alias: | TEM7R |
| Gene Description: | plexin domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
