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Difference between revisions of "TSS:Hg 104212.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=U13948:27 ENST00000307729.11:32 uc001iqt.4:32 BC065376:32 BC080577:32 ENST00000377091.6:34 uc001iqr.3:34 ENST00000377072.7:-117 uc001iqs.4:-117 NM_001195630:-118 NM_001195628:-118 NM_004641:-118 NM_001195627:-118 ENST00000377100.7:-125 uc001iqq.3:-125 BC032532:-125 AB209755:155 ENST00000471315.5:157 uc057sdv.1:157 BC052798:163 BC094844:166 BC129946:168 ENST00000495130.5:179 uc057sdw.1:179 ENST00000621220.4:334 ENST00000377059.7:334 NM_001195626:334 uc057sdx.1:334 uc021pny.2:334 CU687346:334 BC156206:334 BC156949:334 AY598745:334 KJ892460:334 ENST00000476557.5:391 uc057sdy.1:391 ENST00000430455.1:438 ENST00000462999.5:438 ENST00000480415.5:438 ENST00000479634.1:438 uc057sdz.1:438 uc009xkf.2:438 uc009xke.2:438 uc001iqx.2:438 AF060927:438 AF060934:438 AF060935:438 AF060936:438 AF060937:438 AF060938:438
+
|all_trans=HGNC:16063
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 6: Line 6:
 
|distance_to_tss=128
 
|distance_to_tss=128
 
|end=21534311
 
|end=21534311
 +
|end_of_center_position=21534301
 
|entrez_id=8028
 
|entrez_id=8028
 
|gc_percent=0.751244
 
|gc_percent=0.751244
 
|gene_alias=AF10
 
|gene_alias=AF10
|gene_description="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10"
+
|gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor
 
|gene_id=8028
 
|gene_id=8028
|gene_name="myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10"
+
|gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor
 
|gene_source=HGNC:16063
 
|gene_source=HGNC:16063
 
|gene_symbol=MLLT10
 
|gene_symbol=MLLT10
Line 18: Line 19:
 
|hgnc_mgi_id=HGNC:16063
 
|hgnc_mgi_id=HGNC:16063
 
|nearest_ensembl=ENSG00000078403
 
|nearest_ensembl=ENSG00000078403
|nearest_promoter_id=NR_136736
+
|nearest_promoter_id=NM_001195627
 
|nearest_refseq=NM_004641
 
|nearest_refseq=NM_004641
 
|nearest_unigene=Hs.30385
 
|nearest_unigene=Hs.30385
|num_trans=50
+
|num_trans=8028
 
|species=human
 
|species=human
 
|start=21534289
 
|start=21534289
 +
|start_of_center_position=21534300
 
|strand=+
 
|strand=+
 
|transcript_name=U13948
 
|transcript_name=U13948

Latest revision as of 19:05, 19 July 2021

Basic information about the TSS


TSS ID:hg_104212.1
Species:human
Chr:chr10
TSS Classification:yes
Start:21534289
End:21534311
Strand:+
TSS Score:1
Start of the center position in the TSS region:21534300
End of the center position in the TSS region:21534301



Gene and protein annotation


Transcript_name:U13948
Distance:27
GeneID:8028
HGNC/MGI_ID:HGNC:16063
UniProt_ID:
Gene_name:MLLT10 histone lysine methyltransferase DOT1L cofactor
Gene_symbol:MLLT10
Gene_synonyms:AF10
Gene_source:HGNC:16063



Transcript annotation


Transcript_name:U13948
Distance:27
Num_trans:8028
All_trans:HGNC:16063



TATA-Box annotation


Distance to TSS:128
Nearest PromoterID:NM_001195627
Entrez ID:8028
Nearest Unigene:Hs.30385
Nearest Refseq:NM_004641
Nearest Ensembl:ENSG00000078403
Gene Name:MLLT10 histone lysine methyltransferase DOT1L cofactor
Gene Alias:AF10
Gene Description:MLLT10 histone lysine methyltransferase DOT1L cofactor
Gene Type:protein-coding
CpG%:0.1
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):