Difference between revisions of "TSS:Hg 104269.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|KU-CT-1= | |KU-CT-1= | ||
| − | |all_trans= | + | |all_trans=HGNC:30964 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-9 |
|end=22928073 | |end=22928073 | ||
| + | |end_of_center_position=22928045 | ||
|entrez_id=219681 | |entrez_id=219681 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CT81 | + | |gene_alias=CT81{{!}}KU-CT-1 |
|gene_description=armadillo repeat containing 3 | |gene_description=armadillo repeat containing 3 | ||
|gene_id=219681 | |gene_id=219681 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:30964 | |hgnc_mgi_id=HGNC:30964 | ||
|nearest_ensembl=ENSG00000165309 | |nearest_ensembl=ENSG00000165309 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_173081 |
|nearest_refseq=NM_173081 | |nearest_refseq=NM_173081 | ||
|nearest_unigene=Hs.659807 | |nearest_unigene=Hs.659807 | ||
| − | |num_trans= | + | |num_trans=219681 |
|species=human | |species=human | ||
|start=22928015 | |start=22928015 | ||
| + | |start_of_center_position=22928044 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000376528.8 ENST00000409983.7 ENST00000298032.10 ENST00000409049.7 BC039312 AK302985 AY436643 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104269.1 | |tss_id=hg_104269.1 | ||
Latest revision as of 19:06, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 22928044 |
|---|---|
| End of the center position in the TSS region: | 22928045 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376528.8 ENST00000409983.7 ENST00000298032.10 ENST00000409049.7 BC039312 AK302985 AY436643 |
|---|---|
| Distance: | 0 |
| Num_trans: | 219681 |
| All_trans: | HGNC:30964 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_173081 |
| Entrez ID: | 219681 |
| Nearest Unigene: | Hs.659807 |
| Nearest Refseq: | NM_173081 |
| Nearest Ensembl: | ENSG00000165309 |
| Gene Name: | armadillo repeat containing 3 |
| Gene Alias: | CT81|KU-CT-1 |
| Gene Description: | armadillo repeat containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
