Difference between revisions of "TSS:Hg 10428.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 8: | Line 8: | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=233139 |
|end=13982556 | |end=13982556 | ||
| + | |end_of_center_position=13982554 | ||
|entrez_id=7799 | |entrez_id=7799 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=HUMHOXY1 | + | |gene_alias=HUMHOXY1{{!}}KMT8{{!}}KMT8A{{!}}MTB-ZF{{!}}RIZ{{!}}RIZ1{{!}}RIZ2 |
|gene_description=PR/SET domain 2 | |gene_description=PR/SET domain 2 | ||
|gene_name=PRDM2 | |gene_name=PRDM2 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=13982551 | |start=13982551 | ||
| + | |start_of_center_position=13982553 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name= | ||
Latest revision as of 17:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13982553 |
|---|---|
| End of the center position in the TSS region: | 13982554 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 233139 |
|---|---|
| Nearest PromoterID: | NM_001007257 |
| Entrez ID: | 7799 |
| Nearest Unigene: | Hs.371823 |
| Nearest Refseq: | NM_012231 |
| Nearest Ensembl: | ENSG00000116731 |
| Gene Name: | PRDM2 |
| Gene Alias: | HUMHOXY1|KMT8|KMT8A|MTB-ZF|RIZ|RIZ1|RIZ2 |
| Gene Description: | PR/SET domain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
