Difference between revisions of "TSS:Hg 104319.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:25428 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-6 | |distance=-6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=30070 |
|end=24239215 | |end=24239215 | ||
| + | |end_of_center_position=24239208 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
|gene_id=56243 | |gene_id=56243 | ||
| Line 14: | Line 15: | ||
|gene_source=HGNC:25428 | |gene_source=HGNC:25428 | ||
|gene_symbol=KIAA1217 | |gene_symbol=KIAA1217 | ||
| − | |gene_synonyms=DKFZP761L0424 SKT | + | |gene_synonyms=DKFZP761L0424 ETL4 SKT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25428 | |hgnc_mgi_id=HGNC:25428 | ||
|nearest_ensembl=ENSG00000120549 | |nearest_ensembl=ENSG00000120549 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019590 |
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=56243 |
|species=human | |species=human | ||
|start=24239200 | |start=24239200 | ||
| + | |start_of_center_position=24239207 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000438429.5 | + | |transcript_name=ENST00000438429.5 AK096446 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104319.1 | |tss_id=hg_104319.1 | ||
Latest revision as of 19:07, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24239207 |
|---|---|
| End of the center position in the TSS region: | 24239208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000438429.5 AK096446 |
|---|---|
| Distance: | -6 |
| Num_trans: | 56243 |
| All_trans: | HGNC:25428 |
TATA-Box annotation
| Distance to TSS: | 30070 |
|---|---|
| Nearest PromoterID: | NM_019590 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
