Difference between revisions of "TSS:Hg 104328.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF346214:0 MA581791:0 LF205560:0 MA441137:0 LF346215:73 MA581792:73 LF346216:254 MA581793:254 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-16411 |
|end=24433015 | |end=24433015 | ||
| + | |end_of_center_position=24433004 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
|gene_name=KIAA1217 | |gene_name=KIAA1217 | ||
| Line 15: | Line 17: | ||
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=24432991 | |start=24432991 | ||
| + | |start_of_center_position=24433003 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF346214 MA581791 LF205560 MA441137 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104328.1 | |tss_id=hg_104328.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 24433003 |
|---|---|
| End of the center position in the TSS region: | 24433004 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF346214 MA581791 LF205560 MA441137 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | LF346214:0 MA581791:0 LF205560:0 MA441137:0 LF346215:73 MA581792:73 LF346216:254 MA581793:254 |
TATA-Box annotation
| Distance to TSS: | -16411 |
|---|---|
| Nearest PromoterID: | NM_001282769 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
