Difference between revisions of "TSS:Hg 104389.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_000818:50 BC047899:227 BC039038:249 AK127375:-394 ENST00000259271.7:408 M74826:408 ENST00000428517.2:476 BC029517:476 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=115 |
|distance_to_tss=-53 | |distance_to_tss=-53 | ||
|end=26216257 | |end=26216257 | ||
| + | |end_of_center_position=26216254 | ||
|entrez_id=2572 | |entrez_id=2572 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_000818 | |nearest_refseq=NM_000818 | ||
|nearest_unigene=Hs.231829 | |nearest_unigene=Hs.231829 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=26216250 | |start=26216250 | ||
| + | |start_of_center_position=26216253 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_000818.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104389.1 | |tss_id=hg_104389.1 | ||
Latest revision as of 19:09, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26216253 |
|---|---|
| End of the center position in the TSS region: | 26216254 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_000818.3 |
|---|---|
| Distance: | 115 |
| Num_trans: | 8 |
| All_trans: | NM_000818:50 BC047899:227 BC039038:249 AK127375:-394 ENST00000259271.7:408 M74826:408 ENST00000428517.2:476 BC029517:476 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_000818 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
