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Difference between revisions of "TSS:Hg 104394.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=M81882:0 ENST00000428517.2:-9 uc009xkr.5:-9 BC029517:-9 BC126327:22 BC126329:22 AB527954:47 HQ258311:47 X69936:62 ENST00000259271.7:-77 uc001isq.3:-77 M74826:-77 BC039038:-236 BC047899:-258 ENST00000376261.7:-435 NM_001134366:-435 NM_000818:-435 uc001isp.3:-435
+
|all_trans=HGNC:4093
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.135
 
|cpg_percent=0.135
 
|distance=0
 
|distance=0
|distance_to_tss=445
+
|distance_to_tss=-22
 
|end=26216763
 
|end=26216763
 +
|end_of_center_position=26216753
 
|entrez_id=2572
 
|entrez_id=2572
 
|gc_percent=0.731343
 
|gc_percent=0.731343
Line 21: Line 22:
 
|nearest_refseq=NM_000818
 
|nearest_refseq=NM_000818
 
|nearest_unigene=Hs.231829
 
|nearest_unigene=Hs.231829
|num_trans=18
+
|num_trans=2572
 
|species=human
 
|species=human
 
|start=26216741
 
|start=26216741
 +
|start_of_center_position=26216752
 
|strand=+
 
|strand=+
 
|transcript_name=M81882
 
|transcript_name=M81882

Latest revision as of 19:09, 19 July 2021

Basic information about the TSS


TSS ID:hg_104394.1
Species:human
Chr:chr10
TSS Classification:yes
Start:26216741
End:26216763
Strand:+
TSS Score:1
Start of the center position in the TSS region:26216752
End of the center position in the TSS region:26216753



Gene and protein annotation


Transcript_name:M81882
Distance:0
GeneID:2572
HGNC/MGI_ID:HGNC:4093
UniProt_ID:
Gene_name:glutamate decarboxylase 2
Gene_symbol:GAD2
Gene_synonyms:GAD65
Gene_source:HGNC:4093



Transcript annotation


Transcript_name:M81882
Distance:0
Num_trans:2572
All_trans:HGNC:4093



TATA-Box annotation


Distance to TSS:-22
Nearest PromoterID:NM_001134366
Entrez ID:2572
Nearest Unigene:Hs.231829
Nearest Refseq:NM_000818
Nearest Ensembl:ENSG00000136750
Gene Name:glutamate decarboxylase 2
Gene Alias:GAD65
Gene Description:glutamate decarboxylase 2
Gene Type:protein-coding
CpG%:0.135
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):