Difference between revisions of "TSS:Hg 10245.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=560 |entrez_id=22883 |gc_percent=0.79602 |gene_alias=ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 |gene_de...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CDHR12= | ||
| + | |CST-1= | ||
| + | |CSTN1= | ||
| + | |PIK3CD= | ||
| + | |XB31alpha= | ||
| + | |alcalpha1= | ||
| + | |alcalpha2= | ||
| + | |all_trans=HGNC:17447 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=0 | ||
|distance_to_tss=560 | |distance_to_tss=560 | ||
| + | |end=9823979 | ||
| + | |end_of_center_position=9823967 | ||
|entrez_id=22883 | |entrez_id=22883 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=ALC-ALPHA | + | |gene_alias=ALC-ALPHA{{!}}CDHR12{{!}}CST-1{{!}}CSTN1{{!}}PIK3CD{{!}}XB31alpha{{!}}alcalpha1{{!}}alcalpha2 |
|gene_description=calsyntenin 1 | |gene_description=calsyntenin 1 | ||
| − | |gene_name=CLSTN1 | + | |gene_id=22883 |
| + | |gene_name=calsyntenin 1 | ||
| + | |gene_source=HGNC:17447 | ||
| + | |gene_symbol=CLSTN1 | ||
| + | |gene_synonyms=CDHR12 CSTN1 KIAA0911 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17447 | ||
|nearest_ensembl=ENSG00000171603 | |nearest_ensembl=ENSG00000171603 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014944 |
|nearest_refseq=NM_014944 | |nearest_refseq=NM_014944 | ||
|nearest_unigene=Hs.29665 | |nearest_unigene=Hs.29665 | ||
| + | |num_trans=22883 | ||
| + | |species=human | ||
| + | |start=9823953 | ||
| + | |start_of_center_position=9823966 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000377298.9 AK304813 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10245.1 | |tss_id=hg_10245.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4E3Q1 O94985 | ||
}} | }} | ||
Latest revision as of 18:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9823966 |
|---|---|
| End of the center position in the TSS region: | 9823967 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377298.9 AK304813 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22883 |
| All_trans: | HGNC:17447 |
TATA-Box annotation
| Distance to TSS: | 560 |
|---|---|
| Nearest PromoterID: | NM_014944 |
| Entrez ID: | 22883 |
| Nearest Unigene: | Hs.29665 |
| Nearest Refseq: | NM_014944 |
| Nearest Ensembl: | ENSG00000171603 |
| Gene Name: | calsyntenin 1 |
| Gene Alias: | ALC-ALPHA|CDHR12|CST-1|CSTN1|PIK3CD|XB31alpha|alcalpha1|alcalpha2 |
| Gene Description: | calsyntenin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
