Difference between revisions of "TSS:Hg 104454.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|WARBM3= | |WARBM3= | ||
| − | |all_trans= | + | |all_trans=HGNC:14244 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-5 |
|end=27504318 | |end=27504318 | ||
| + | |end_of_center_position=27504300 | ||
|entrez_id=22931 | |entrez_id=22931 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=RAB18LI1 | + | |gene_alias=RAB18LI1{{!}}WARBM3 |
| − | |gene_description= | + | |gene_description=RAB18, member RAS oncogene family |
|gene_id=22931 | |gene_id=22931 | ||
| − | |gene_name= | + | |gene_name=RAB18, member RAS oncogene family |
|gene_source=HGNC:14244 | |gene_source=HGNC:14244 | ||
|gene_symbol=RAB18 | |gene_symbol=RAB18 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:14244 | |hgnc_mgi_id=HGNC:14244 | ||
|nearest_ensembl=ENSG00000099246 | |nearest_ensembl=ENSG00000099246 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001256411 |
|nearest_refseq=NM_021252 | |nearest_refseq=NM_021252 | ||
|nearest_unigene=Hs.406799 | |nearest_unigene=Hs.406799 | ||
| − | |num_trans= | + | |num_trans=22931 |
|species=human | |species=human | ||
|start=27504280 | |start=27504280 | ||
| + | |start_of_center_position=27504299 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000490236.2 | + | |transcript_name=ENST00000490236.2 ENST00000356940.11 AY574034 AK297629 AK299457 AK295443 BC029350 AF136974 AF087860 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104454.1 | |tss_id=hg_104454.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B7Z4P9 B7Z5V3 | + | |uniprot_id=B7Z4P9 B7Z5V3 Q9NP72 |
}} | }} | ||
Latest revision as of 19:10, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27504299 |
|---|---|
| End of the center position in the TSS region: | 27504300 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000490236.2 ENST00000356940.11 AY574034 AK297629 AK299457 AK295443 BC029350 AF136974 AF087860 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22931 |
| All_trans: | HGNC:14244 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001256411 |
| Entrez ID: | 22931 |
| Nearest Unigene: | Hs.406799 |
| Nearest Refseq: | NM_021252 |
| Nearest Ensembl: | ENSG00000099246 |
| Gene Name: | RAB18, member RAS oncogene family |
| Gene Alias: | RAB18LI1|WARBM3 |
| Gene Description: | RAB18, member RAS oncogene family |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
