Difference between revisions of "TSS:Hg 104543.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 6: | Line 6: | ||
|TPL2= | |TPL2= | ||
|Tpl-2= | |Tpl-2= | ||
| − | |all_trans= | + | |all_trans=HGNC:6860 |
|c-COT= | |c-COT= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 13: | Line 13: | ||
|distance_to_tss=15 | |distance_to_tss=15 | ||
|end=30434040 | |end=30434040 | ||
| + | |end_of_center_position=30434036 | ||
|entrez_id=1326 | |entrez_id=1326 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=AURA2 | + | |gene_alias=AURA2{{!}}COT{{!}}EST{{!}}ESTF{{!}}MEKK8{{!}}TPL2{{!}}Tpl-2{{!}}c-COT |
|gene_description=mitogen-activated protein kinase kinase kinase 8 | |gene_description=mitogen-activated protein kinase kinase kinase 8 | ||
|gene_id=1326 | |gene_id=1326 | ||
| Line 25: | Line 26: | ||
|hgnc_mgi_id=HGNC:6860 | |hgnc_mgi_id=HGNC:6860 | ||
|nearest_ensembl=ENSG00000107968 | |nearest_ensembl=ENSG00000107968 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001244134 |
|nearest_refseq=NM_005204 | |nearest_refseq=NM_005204 | ||
|nearest_unigene=Hs.432453 | |nearest_unigene=Hs.432453 | ||
| − | |num_trans= | + | |num_trans=1326 |
|species=human | |species=human | ||
|start=30434031 | |start=30434031 | ||
| + | |start_of_center_position=30434035 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000542547.5 | + | |transcript_name=ENST00000542547.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104543.1 | |tss_id=hg_104543.1 | ||
Latest revision as of 19:12, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30434035 |
|---|---|
| End of the center position in the TSS region: | 30434036 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000542547.5 |
|---|---|
| Distance: | -11 |
| Num_trans: | 1326 |
| All_trans: | HGNC:6860 |
TATA-Box annotation
| Distance to TSS: | 15 |
|---|---|
| Nearest PromoterID: | NM_001244134 |
| Entrez ID: | 1326 |
| Nearest Unigene: | Hs.432453 |
| Nearest Refseq: | NM_005204 |
| Nearest Ensembl: | ENSG00000107968 |
| Gene Name: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Alias: | AURA2|COT|EST|ESTF|MEKK8|TPL2|Tpl-2|c-COT |
| Gene Description: | mitogen-activated protein kinase kinase kinase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
