Difference between revisions of "TSS:Hg 102469.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=196 |entrez_id=5537 |gc_percent=0.651741 |gene_alias=PP6|PP6C |gene_description=protein phosphatase 6 catalytic subunit |gene_na...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PP6C= | ||
| + | |all_trans=HGNC:9323 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=60 | ||
| + | |end=125189748 | ||
| + | |end_of_center_position=125189743 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6{{!}}PP6C |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
| − | |gene_name=PPP6C | + | |gene_id=5537 |
| + | |gene_name=protein phosphatase 6 catalytic subunit | ||
| + | |gene_source=HGNC:9323 | ||
| + | |gene_symbol=PPP6C | ||
| + | |gene_synonyms=PP6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9323 | ||
|nearest_ensembl=ENSG00000119414 | |nearest_ensembl=ENSG00000119414 | ||
|nearest_promoter_id=NM_002721 | |nearest_promoter_id=NM_002721 | ||
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| + | |num_trans=5537 | ||
| + | |species=human | ||
| + | |start=125189737 | ||
| + | |start_of_center_position=125189742 | ||
| + | |strand=- | ||
| + | |transcript_name=X92972 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102469.1 | |tss_id=hg_102469.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 18:27, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189742 |
|---|---|
| End of the center position in the TSS region: | 125189743 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X92972 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5537 |
| All_trans: | HGNC:9323 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6|PP6C |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
