Difference between revisions of "TSS:Hg 104608.1"
From referenceTSS
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| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| − | |all_trans= | + | |all_trans=HGNC:11642 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=31321230 | |end=31321230 | ||
| + | |end_of_center_position=31321206 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
|gene_id=6935 | |gene_id=6935 | ||
| Line 26: | Line 27: | ||
|hgnc_mgi_id=HGNC:11642 | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323665 |
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| − | |num_trans= | + | |num_trans=6935 |
|species=human | |species=human | ||
|start=31321181 | |start=31321181 | ||
| + | |start_of_center_position=31321205 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK311201 | |transcript_name=AK311201 | ||
| Line 37: | Line 39: | ||
|tss_id=hg_104608.1 | |tss_id=hg_104608.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P37275 |
}} | }} | ||
Latest revision as of 19:13, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 31321205 |
|---|---|
| End of the center position in the TSS region: | 31321206 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK311201 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6935 |
| All_trans: | HGNC:11642 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001323665 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
