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Difference between revisions of "TSS:Hg 104727.1"

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{{TSSDetail
 
{{TSSDetail
 
|Hsd17b_2=
 
|Hsd17b_2=
|all_trans=AK307174:0 AK293968:0 ENST00000494540.5:-7 NR_003086:-7 BC071987:-7 AF165517:-9 AF165514:-10 AY829267:-16 AK295332:-21 ENST00000471365.1:38 CU687208:38 KJ900921:38
+
|all_trans=HGNC:28120
 
|bA291L22.1=
 
|bA291L22.1=
 
|chr=chr10
 
|chr=chr10
Line 8: Line 8:
 
|distance_to_tss=22
 
|distance_to_tss=22
 
|end=38356417
 
|end=38356417
 +
|end_of_center_position=38356402
 
|entrez_id=158160
 
|entrez_id=158160
 
|gc_percent=0.587065
 
|gc_percent=0.587065
|gene_alias=HSD17B7|Hsd17b_2|bA291L22.1
+
|gene_alias=HSD17B7{{!}}Hsd17b_2{{!}}bA291L22.1
 
|gene_description=hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
 
|gene_description=hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
 
|gene_id=158160
 
|gene_id=158160
|gene_name=hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
+
|gene_name=hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
 
|gene_source=HGNC:28120
 
|gene_source=HGNC:28120
 
|gene_symbol=HSD17B7P2
 
|gene_symbol=HSD17B7P2
Line 23: Line 24:
 
|nearest_refseq=NM_182829
 
|nearest_refseq=NM_182829
 
|nearest_unigene=Hs.652484
 
|nearest_unigene=Hs.652484
|num_trans=12
+
|num_trans=158160
 
|species=human
 
|species=human
 
|start=38356386
 
|start=38356386
 +
|start_of_center_position=38356401
 
|strand=+
 
|strand=+
 
|transcript_name=AK307174 AK293968
 
|transcript_name=AK307174 AK293968

Latest revision as of 19:16, 19 July 2021

Basic information about the TSS


TSS ID:hg_104727.1
Species:human
Chr:chr10
TSS Classification:yes
Start:38356386
End:38356417
Strand:+
TSS Score:1
Start of the center position in the TSS region:38356401
End of the center position in the TSS region:38356402



Gene and protein annotation


Transcript_name:AK307174 AK293968
Distance:0
GeneID:158160
HGNC/MGI_ID:HGNC:28120
UniProt_ID:B4DF79
Gene_name:hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
Gene_symbol:HSD17B7P2
Gene_synonyms:HSD17B7 bA291L22.1
Gene_source:HGNC:28120



Transcript annotation


Transcript_name:AK307174 AK293968
Distance:0
Num_trans:158160
All_trans:HGNC:28120



TATA-Box annotation


Distance to TSS:22
Nearest PromoterID:NR_003086
Entrez ID:158160
Nearest Unigene:Hs.652484
Nearest Refseq:NM_182829
Nearest Ensembl:ENSG00000099251
Gene Name:hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
Gene Alias:HSD17B7|Hsd17b_2|bA291L22.1
Gene Description:hydroxysteroid 17-beta dehydrogenase 7 pseudogene 2
Gene Type:pseudo
CpG%:0.09
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):