Difference between revisions of "TSS:Hg 104756.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF365347:-34 MA600924:-34 LF365348:-219 MA600925:-219 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-34 |
|distance_to_tss=4038 | |distance_to_tss=4038 | ||
|end=43375686 | |end=43375686 | ||
| + | |end_of_center_position=43375682 | ||
|entrez_id=53828 | |entrez_id=53828 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| Line 12: | Line 14: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000150201 | |nearest_ensembl=ENSG00000150201 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184963 |
|nearest_refseq=NM_173160 | |nearest_refseq=NM_173160 | ||
|nearest_unigene=Hs.130497 | |nearest_unigene=Hs.130497 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=43375677 | |start=43375677 | ||
| + | |start_of_center_position=43375681 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF365347 MA600924 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_104756.1 | |tss_id=hg_104756.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 19:12, 12 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 43375681 |
|---|---|
| End of the center position in the TSS region: | 43375682 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF365347 MA600924 |
|---|---|
| Distance: | -34 |
| Num_trans: | 4 |
| All_trans: | LF365347:-34 MA600924:-34 LF365348:-219 MA600925:-219 |
TATA-Box annotation
| Distance to TSS: | 4038 |
|---|---|
| Nearest PromoterID: | NM_001184963 |
| Entrez ID: | 53828 |
| Nearest Unigene: | Hs.130497 |
| Nearest Refseq: | NM_173160 |
| Nearest Ensembl: | ENSG00000150201 |
| Gene Name: | FXYD4 |
| Gene Alias: | CHIF |
| Gene Description: | FXYD domain containing ion transport regulator 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
