Difference between revisions of "TSS:Hg 104773.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|KSP37= | |KSP37= | ||
| − | |all_trans= | + | |all_trans=HGNC:31658 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=44911363 | |end=44911363 | ||
| + | |end_of_center_position=44911348 | ||
|entrez_id=643236 | |entrez_id=643236 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=C10orf127 | + | |gene_alias=C10orf127{{!}}KSP37 |
|gene_description=transmembrane protein 72 | |gene_description=transmembrane protein 72 | ||
|gene_id=643236 | |gene_id=643236 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:31658 | |hgnc_mgi_id=HGNC:31658 | ||
|nearest_ensembl=ENSG00000187783 | |nearest_ensembl=ENSG00000187783 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001123376 |
|nearest_refseq=NM_001123376 | |nearest_refseq=NM_001123376 | ||
|nearest_unigene=Hs.292788 | |nearest_unigene=Hs.292788 | ||
| − | |num_trans= | + | |num_trans=643236 |
|species=human | |species=human | ||
|start=44911331 | |start=44911331 | ||
| + | |start_of_center_position=44911347 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AB235418 | + | |transcript_name=ENST00000389583.5 AB235418 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104773.1 | |tss_id=hg_104773.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0PK05 |
}} | }} | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 44911347 |
|---|---|
| End of the center position in the TSS region: | 44911348 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000389583.5 AB235418 |
|---|---|
| Distance: | 0 |
| Num_trans: | 643236 |
| All_trans: | HGNC:31658 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001123376 |
| Entrez ID: | 643236 |
| Nearest Unigene: | Hs.292788 |
| Nearest Refseq: | NM_001123376 |
| Nearest Ensembl: | ENSG00000187783 |
| Gene Name: | transmembrane protein 72 |
| Gene Alias: | C10orf127|KSP37 |
| Gene Description: | transmembrane protein 72 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
