Difference between revisions of "TSS:Hg 104788.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 3: | Line 3: | ||
|5LPG= | |5LPG= | ||
|LOG5= | |LOG5= | ||
| − | |all_trans= | + | |all_trans=HGNC:435 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=45374232 | |end=45374232 | ||
| + | |end_of_center_position=45374219 | ||
|entrez_id=240 | |entrez_id=240 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=5-LO | + | |gene_alias=5-LO{{!}}5-LOX{{!}}5LPG{{!}}LOG5 |
|gene_description=arachidonate 5-lipoxygenase | |gene_description=arachidonate 5-lipoxygenase | ||
|gene_id=240 | |gene_id=240 | ||
| Line 21: | Line 22: | ||
|hgnc_mgi_id=HGNC:435 | |hgnc_mgi_id=HGNC:435 | ||
|nearest_ensembl=ENSG00000012779 | |nearest_ensembl=ENSG00000012779 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001320861 |
|nearest_refseq=NM_000698 | |nearest_refseq=NM_000698 | ||
|nearest_unigene=Hs.89499 | |nearest_unigene=Hs.89499 | ||
| − | |num_trans= | + | |num_trans=240 |
|species=human | |species=human | ||
|start=45374204 | |start=45374204 | ||
| + | |start_of_center_position=45374218 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374391. | + | |transcript_name=ENST00000374391.7 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223 BC034464 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104788.1 | |tss_id=hg_104788.1 | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45374218 |
|---|---|
| End of the center position in the TSS region: | 45374219 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374391.7 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223 BC034464 |
|---|---|
| Distance: | 0 |
| Num_trans: | 240 |
| All_trans: | HGNC:435 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001320861 |
| Entrez ID: | 240 |
| Nearest Unigene: | Hs.89499 |
| Nearest Refseq: | NM_000698 |
| Nearest Ensembl: | ENSG00000012779 |
| Gene Name: | arachidonate 5-lipoxygenase |
| Gene Alias: | 5-LO|5-LOX|5LPG|LOG5 |
| Gene Description: | arachidonate 5-lipoxygenase |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
