Difference between revisions of "TSS:Mm 146385.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000181931.2:-234 AK147472:-234 AK144971:399 |chr=chr18 |cpg_percent=0.205 |distance=-234 |distance_to_tss=200 |end=82692550 |entrez_id=329002 |...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Gm335= |
| + | |all_trans=MGI:3642791 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.205 | |cpg_percent=0.205 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=200 | |distance_to_tss=200 | ||
|end=82692550 | |end=82692550 | ||
| + | |end_of_center_position=82692534 | ||
|entrez_id=329002 | |entrez_id=329002 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
| − | |gene_alias=AI447957 | + | |gene_alias=AI447957{{!}}Gm335 |
|gene_description=zinc finger protein 236 | |gene_description=zinc finger protein 236 | ||
|gene_id=100038564 | |gene_id=100038564 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_177832 | |nearest_refseq=NM_177832 | ||
|nearest_unigene=Mm.34438 | |nearest_unigene=Mm.34438 | ||
| − | |num_trans= | + | |num_trans=100038564 |
|species=mouse | |species=mouse | ||
|start=82692517 | |start=82692517 | ||
| + | |start_of_center_position=82692533 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000181931.2 AK147472 | |transcript_name=ENSMUST00000181931.2 AK147472 | ||
Latest revision as of 03:28, 27 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 82692533 |
|---|---|
| End of the center position in the TSS region: | 82692534 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000181931.2 AK147472 |
|---|---|
| Distance: | -234 |
| Num_trans: | 100038564 |
| All_trans: | MGI:3642791 |
TATA-Box annotation
| Distance to TSS: | 200 |
|---|---|
| Nearest PromoterID: | NM_177832 |
| Entrez ID: | 329002 |
| Nearest Unigene: | Mm.34438 |
| Nearest Refseq: | NM_177832 |
| Nearest Ensembl: | ENSMUSG00000041258 |
| Gene Name: | predicted gene 10524 |
| Gene Alias: | AI447957|Gm335 |
| Gene Description: | zinc finger protein 236 |
| Gene Type: | protein-coding |
| CpG%: | 0.205 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
