Difference between revisions of "TSS:Hg 104802.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 9: | Line 9: | ||
|PSP57= | |PSP57= | ||
|PSP94= | |PSP94= | ||
| − | |all_trans= | + | |all_trans=HGNC:36016 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 15: | Line 15: | ||
|distance_to_tss=-16970 | |distance_to_tss=-16970 | ||
|end=46063245 | |end=46063245 | ||
| + | |end_of_center_position=46063239 | ||
|entrez_id=4477 | |entrez_id=4477 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=HPC13 | + | |gene_alias=HPC13{{!}}IGBF{{!}}MSP{{!}}MSPB{{!}}PN44{{!}}PRPS{{!}}PSP{{!}}PSP-94{{!}}PSP57{{!}}PSP94 |
|gene_description=microseminoprotein beta | |gene_description=microseminoprotein beta | ||
|gene_id= | |gene_id= | ||
| Line 30: | Line 31: | ||
|nearest_refseq=NM_002443 | |nearest_refseq=NM_002443 | ||
|nearest_unigene=Hs.255462 | |nearest_unigene=Hs.255462 | ||
| − | |num_trans= | + | |num_trans= |
|species=human | |species=human | ||
|start=46063232 | |start=46063232 | ||
| + | |start_of_center_position=46063238 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=70(GGATTTAAAGGC,-,0.00) |
|transcript_name=ENST00000623642.2 | |transcript_name=ENST00000623642.2 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:17, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46063238 |
|---|---|
| End of the center position in the TSS region: | 46063239 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000623642.2 |
|---|---|
| Distance: | 5 |
| Num_trans: | |
| All_trans: | HGNC:36016 |
TATA-Box annotation
| Distance to TSS: | -16970 |
|---|---|
| Nearest PromoterID: | NM_138634 |
| Entrez ID: | 4477 |
| Nearest Unigene: | Hs.255462 |
| Nearest Refseq: | NM_002443 |
| Nearest Ensembl: | ENSG00000263639 |
| Gene Name: | ribosomal protein L23a pseudogene 61 |
| Gene Alias: | HPC13|IGBF|MSP|MSPB|PN44|PRPS|PSP|PSP-94|PSP57|PSP94 |
| Gene Description: | microseminoprotein beta |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 70(GGATTTAAAGGC,-,0.00) |
