Difference between revisions of "TSS:Hg 104883.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26973 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=49299179 | |end=49299179 | ||
| + | |end_of_center_position=49299169 | ||
|entrez_id=118461 | |entrez_id=118461 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=CEFIP |
|gene_description=chromosome 10 open reading frame 71 | |gene_description=chromosome 10 open reading frame 71 | ||
|gene_id=118461 | |gene_id=118461 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_199459 | |nearest_refseq=NM_199459 | ||
|nearest_unigene=Hs.585480 | |nearest_unigene=Hs.585480 | ||
| − | |num_trans= | + | |num_trans=118461 |
|species=human | |species=human | ||
|start=49299158 | |start=49299158 | ||
| + | |start_of_center_position=49299168 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374144. | + | |transcript_name=ENST00000374144.8 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104883.1 | |tss_id=hg_104883.1 | ||
Latest revision as of 19:19, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 49299168 |
|---|---|
| End of the center position in the TSS region: | 49299169 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374144.8 |
|---|---|
| Distance: | 0 |
| Num_trans: | 118461 |
| All_trans: | HGNC:26973 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001135196 |
| Entrez ID: | 118461 |
| Nearest Unigene: | Hs.585480 |
| Nearest Refseq: | NM_199459 |
| Nearest Ensembl: | ENSG00000177354 |
| Gene Name: | chromosome 10 open reading frame 71 |
| Gene Alias: | CEFIP |
| Gene Description: | chromosome 10 open reading frame 71 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
