Difference between revisions of "TSS:Hg 104909.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=-169961 | |distance_to_tss=-169961 | ||
|end=50418590 | |end=50418590 | ||
| + | |end_of_center_position=50418572 | ||
|entrez_id=56624 | |entrez_id=56624 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=BCDase | + | |gene_alias=BCDase{{!}}HNAC1{{!}}LCDase{{!}}N-CDase{{!}}NCDase |
|gene_description=N-acylsphingosine amidohydrolase 2 | |gene_description=N-acylsphingosine amidohydrolase 2 | ||
|gene_name=ASAH2 | |gene_name=ASAH2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000188611 | |nearest_ensembl=ENSG00000188611 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019893 |
|nearest_refseq=NM_019893 | |nearest_refseq=NM_019893 | ||
|nearest_unigene=Hs.512645 | |nearest_unigene=Hs.512645 | ||
| Line 22: | Line 23: | ||
|species=human | |species=human | ||
|start=50418552 | |start=50418552 | ||
| + | |start_of_center_position=50418571 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=43(TTCTAGAAAAGG,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 18:01, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 50418571 |
|---|---|
| End of the center position in the TSS region: | 50418572 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -169961 |
|---|---|
| Nearest PromoterID: | NM_019893 |
| Entrez ID: | 56624 |
| Nearest Unigene: | Hs.512645 |
| Nearest Refseq: | NM_019893 |
| Nearest Ensembl: | ENSG00000188611 |
| Gene Name: | ASAH2 |
| Gene Alias: | BCDase|HNAC1|LCDase|N-CDase|NCDase |
| Gene Description: | N-acylsphingosine amidohydrolase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 43(TTCTAGAAAAGG,-,0.00) |
