Difference between revisions of "TSS:Mm 147840.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |Ecg2= | ||
| + | |all_trans=MGI:3642511 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-146 |
| − | |distance_to_tss=- | + | |distance_to_tss=-19395 |
|end=62615723 | |end=62615723 | ||
| + | |end_of_center_position=62615721 | ||
|entrez_id=408198 | |entrez_id=408198 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=EG408198 | + | |gene_alias=EG408198{{!}}Ecg2 |
| − | |gene_description= | + | |gene_description=serine peptidase inhibitor, Kazal type 7 (putative) |
| − | |gene_name= | + | |gene_id=100038417 |
| + | |gene_name=serine peptidase inhibitor, Kazal type 13 | ||
| + | |gene_source=MGI:3642511 | ||
| + | |gene_symbol=Spink13 | ||
| + | |gene_synonyms=Gm10534 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=MGI:3642511 | ||
|nearest_ensembl=ENSMUSG00000060201 | |nearest_ensembl=ENSMUSG00000060201 | ||
|nearest_promoter_id=NM_001001803 | |nearest_promoter_id=NM_001001803 | ||
|nearest_refseq=NM_001001803 | |nearest_refseq=NM_001001803 | ||
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=100038417 |
|species=mouse | |species=mouse | ||
|start=62615717 | |start=62615717 | ||
| + | |start_of_center_position=62615720 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000235190.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_147840.1 | |tss_id=mm_147840.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q3UTS8 | ||
}} | }} | ||
Latest revision as of 04:01, 27 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 62615720 |
|---|---|
| End of the center position in the TSS region: | 62615721 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000235190.1 |
|---|---|
| Distance: | -146 |
| Num_trans: | 100038417 |
| All_trans: | MGI:3642511 |
TATA-Box annotation
| Distance to TSS: | -19395 |
|---|---|
| Nearest PromoterID: | NM_001001803 |
| Entrez ID: | 408198 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001001803 |
| Nearest Ensembl: | ENSMUSG00000060201 |
| Gene Name: | serine peptidase inhibitor, Kazal type 13 |
| Gene Alias: | EG408198|Ecg2 |
| Gene Description: | serine peptidase inhibitor, Kazal type 7 (putative) |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
