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Difference between revisions of "TSS:Hg 105180.1"

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{{TSSDetail
 
{{TSSDetail
 
|Yip2b=
 
|Yip2b=
|all_trans=BC038724:0 AK289976:0 BC010040:-26 BC057832:-31 AY562241:63 CU686667:63 HQ447522:63 KJ534927:63 KJ535017:63 KJ535031:63 KJ895854:63 ENST00000373758.4:-76 NM_001001330:-76 uc057tnv.1:-76 uc001jmt.3:-76 BC068557:-76
+
|all_trans=HGNC:23711
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.145
 
|cpg_percent=0.145
 
|distance=0
 
|distance=0
|distance_to_tss=98
+
|distance_to_tss=60
 
|end=63521483
 
|end=63521483
 +
|end_of_center_position=63521461
 
|entrez_id=221035
 
|entrez_id=221035
 
|gc_percent=0.79602
 
|gc_percent=0.79602
|gene_alias=C10orf74|Yip2b
+
|gene_alias=C10orf74{{!}}Yip2b
 
|gene_description=receptor accessory protein 3
 
|gene_description=receptor accessory protein 3
 
|gene_id=221035
 
|gene_id=221035
Line 22: Line 23:
 
|nearest_refseq=NM_001001330
 
|nearest_refseq=NM_001001330
 
|nearest_unigene=Hs.499833
 
|nearest_unigene=Hs.499833
|num_trans=16
+
|num_trans=221035
 
|species=human
 
|species=human
 
|start=63521438
 
|start=63521438
 +
|start_of_center_position=63521460
 
|strand=+
 
|strand=+
 
|transcript_name=BC038724 AK289976
 
|transcript_name=BC038724 AK289976

Latest revision as of 19:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_105180.1
Species:human
Chr:chr10
TSS Classification:yes
Start:63521438
End:63521483
Strand:+
TSS Score:1
Start of the center position in the TSS region:63521460
End of the center position in the TSS region:63521461



Gene and protein annotation


Transcript_name:BC038724 AK289976
Distance:0
GeneID:221035
HGNC/MGI_ID:HGNC:23711
UniProt_ID:A8K1R1
Gene_name:receptor accessory protein 3
Gene_symbol:REEP3
Gene_synonyms:Yip2b
Gene_source:HGNC:23711



Transcript annotation


Transcript_name:BC038724 AK289976
Distance:0
Num_trans:221035
All_trans:HGNC:23711



TATA-Box annotation


Distance to TSS:60
Nearest PromoterID:NM_001001330
Entrez ID:221035
Nearest Unigene:Hs.499833
Nearest Refseq:NM_001001330
Nearest Ensembl:ENSG00000165476
Gene Name:receptor accessory protein 3
Gene Alias:C10orf74|Yip2b
Gene Description:receptor accessory protein 3
Gene Type:protein-coding
CpG%:0.145
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):