Difference between revisions of "TSS:Hg 105307.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|PRG= | |PRG= | ||
|PRG1= | |PRG1= | ||
| − | |all_trans= | + | |all_trans=HGNC:9361 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=11 | |distance=11 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8981 |
|end=69097094 | |end=69097094 | ||
| + | |end_of_center_position=69097085 | ||
|entrez_id=5552 | |entrez_id=5552 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=PPG | + | |gene_alias=PPG{{!}}PRG{{!}}PRG1 |
|gene_description=serglycin | |gene_description=serglycin | ||
|gene_id=5552 | |gene_id=5552 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:9361 | |hgnc_mgi_id=HGNC:9361 | ||
|nearest_ensembl=ENSG00000122862 | |nearest_ensembl=ENSG00000122862 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_002727 |
|nearest_refseq=NM_002727 | |nearest_refseq=NM_002727 | ||
|nearest_unigene=Hs.1908 | |nearest_unigene=Hs.1908 | ||
| − | |num_trans= | + | |num_trans=5552 |
|species=human | |species=human | ||
|start=69097074 | |start=69097074 | ||
| + | |start_of_center_position=69097084 | ||
|strand=+ | |strand=+ | ||
|transcript_name=X12765 | |transcript_name=X12765 | ||
Latest revision as of 19:28, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69097084 |
|---|---|
| End of the center position in the TSS region: | 69097085 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | X12765 |
|---|---|
| Distance: | 11 |
| Num_trans: | 5552 |
| All_trans: | HGNC:9361 |
TATA-Box annotation
| Distance to TSS: | 8981 |
|---|---|
| Nearest PromoterID: | NM_002727 |
| Entrez ID: | 5552 |
| Nearest Unigene: | Hs.1908 |
| Nearest Refseq: | NM_002727 |
| Nearest Ensembl: | ENSG00000122862 |
| Gene Name: | serglycin |
| Gene Alias: | PPG|PRG|PRG1 |
| Gene Description: | serglycin |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
