Difference between revisions of "TSS:Hg 105478.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|C6ST1= | |C6ST1= | ||
|HSD= | |HSD= | ||
| − | |all_trans= | + | |all_trans=HGNC:1971 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=86 | |distance=86 | ||
| − | |distance_to_tss= | + | |distance_to_tss=46217 |
|end=72010613 | |end=72010613 | ||
| + | |end_of_center_position=72010613 | ||
|entrez_id=9469 | |entrez_id=9469 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=C6ST | + | |gene_alias=C6ST{{!}}C6ST1{{!}}HSD |
|gene_description=carbohydrate sulfotransferase 3 | |gene_description=carbohydrate sulfotransferase 3 | ||
|gene_id=9469 | |gene_id=9469 | ||
| − | |gene_name=carbohydrate | + | |gene_name=carbohydrate sulfotransferase 3 |
|gene_source=HGNC:1971 | |gene_source=HGNC:1971 | ||
|gene_symbol=CHST3 | |gene_symbol=CHST3 | ||
| Line 23: | Line 24: | ||
|nearest_refseq=NM_004273 | |nearest_refseq=NM_004273 | ||
|nearest_unigene=Hs.158304 | |nearest_unigene=Hs.158304 | ||
| − | |num_trans= | + | |num_trans=9469 |
|species=human | |species=human | ||
|start=72010611 | |start=72010611 | ||
| + | |start_of_center_position=72010612 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-91(GCCTATTTGAGC,-,0.00) |
|transcript_name=BC033183 | |transcript_name=BC033183 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72010612 |
|---|---|
| End of the center position in the TSS region: | 72010613 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC033183 |
|---|---|
| Distance: | 86 |
| Num_trans: | 9469 |
| All_trans: | HGNC:1971 |
TATA-Box annotation
| Distance to TSS: | 46217 |
|---|---|
| Nearest PromoterID: | NM_004273 |
| Entrez ID: | 9469 |
| Nearest Unigene: | Hs.158304 |
| Nearest Refseq: | NM_004273 |
| Nearest Ensembl: | ENSG00000122863 |
| Gene Name: | carbohydrate sulfotransferase 3 |
| Gene Alias: | C6ST|C6ST1|HSD |
| Gene Description: | carbohydrate sulfotransferase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -91(GCCTATTTGAGC,-,0.00) |
