Difference between revisions of "TSS:Hg 105512.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|CCDC109A= | |CCDC109A= | ||
|HsMCU= | |HsMCU= | ||
| − | |all_trans= | + | |all_trans=HGNC:23526 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 8: | Line 8: | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=72692122 | |end=72692122 | ||
| + | |end_of_center_position=72692119 | ||
|entrez_id=90550 | |entrez_id=90550 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=C10orf42 | + | |gene_alias=C10orf42{{!}}CCDC109A{{!}}HsMCU |
|gene_description=mitochondrial calcium uniporter | |gene_description=mitochondrial calcium uniporter | ||
|gene_id=90550 | |gene_id=90550 | ||
| Line 20: | Line 21: | ||
|hgnc_mgi_id=HGNC:23526 | |hgnc_mgi_id=HGNC:23526 | ||
|nearest_ensembl=ENSG00000156026 | |nearest_ensembl=ENSG00000156026 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001270679 |
|nearest_refseq=NM_138357 | |nearest_refseq=NM_138357 | ||
|nearest_unigene=Hs.591366 | |nearest_unigene=Hs.591366 | ||
| − | |num_trans= | + | |num_trans=90550 |
|species=human | |species=human | ||
|start=72692115 | |start=72692115 | ||
| + | |start_of_center_position=72692118 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000373053.7 | + | |transcript_name=ENST00000373053.7 BC034235 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105512.1 | |tss_id=hg_105512.1 | ||
Latest revision as of 19:32, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72692118 |
|---|---|
| End of the center position in the TSS region: | 72692119 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373053.7 BC034235 |
|---|---|
| Distance: | 9 |
| Num_trans: | 90550 |
| All_trans: | HGNC:23526 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001270679 |
| Entrez ID: | 90550 |
| Nearest Unigene: | Hs.591366 |
| Nearest Refseq: | NM_138357 |
| Nearest Ensembl: | ENSG00000156026 |
| Gene Name: | mitochondrial calcium uniporter |
| Gene Alias: | C10orf42|CCDC109A|HsMCU |
| Gene Description: | mitochondrial calcium uniporter |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
