Difference between revisions of "TSS:Hg 105553.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23528 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-8 |
|end=73785625 | |end=73785625 | ||
| + | |end_of_center_position=73785599 | ||
|entrez_id=23053 | |entrez_id=23053 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:23528 | |hgnc_mgi_id=HGNC:23528 | ||
|nearest_ensembl=ENSG00000214655 | |nearest_ensembl=ENSG00000214655 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001242488 |
|nearest_refseq=NM_015037 | |nearest_refseq=NM_015037 | ||
|nearest_unigene=Hs.65135 | |nearest_unigene=Hs.65135 | ||
| − | |num_trans= | + | |num_trans=23053 |
|species=human | |species=human | ||
|start=73785571 | |start=73785571 | ||
| + | |start_of_center_position=73785598 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000604729. | + | |transcript_name=ENST00000604729.6 ENST00000603114.5 ENST00000398706.6 AK091621 AB020720 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105553.1 | |tss_id=hg_105553.1 | ||
Latest revision as of 19:33, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 73785598 |
|---|---|
| End of the center position in the TSS region: | 73785599 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000604729.6 ENST00000603114.5 ENST00000398706.6 AK091621 AB020720 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23053 |
| All_trans: | HGNC:23528 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_001242488 |
| Entrez ID: | 23053 |
| Nearest Unigene: | Hs.65135 |
| Nearest Refseq: | NM_015037 |
| Nearest Ensembl: | ENSG00000214655 |
| Gene Name: | zinc finger SWIM-type containing 8 |
| Gene Alias: | KIAA0913 |
| Gene Description: | zinc finger SWIM-type containing 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
