Difference between revisions of "TSS:Hg 106035.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|KILLIN= | |KILLIN= | ||
| − | |all_trans= | + | |all_trans=HGNC:9588 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=87863357 | |end=87863357 | ||
| + | |end_of_center_position=87863355 | ||
|entrez_id=100144748 | |entrez_id=100144748 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=CWS4 | + | |gene_alias=CWS4{{!}}KILLIN |
| − | |gene_description= | + | |gene_description=killin, p53 regulated DNA replication inhibitor |
|gene_id=5728 | |gene_id=5728 | ||
|gene_name=phosphatase and tensin homolog | |gene_name=phosphatase and tensin homolog | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_001126049 | |nearest_refseq=NM_001126049 | ||
|nearest_unigene=Hs.559820 | |nearest_unigene=Hs.559820 | ||
| − | |num_trans= | + | |num_trans=5728 |
|species=human | |species=human | ||
|start=87863351 | |start=87863351 | ||
| + | |start_of_center_position=87863354 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=U92436 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106035.1 | |tss_id=hg_106035.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:44, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87863354 |
|---|---|
| End of the center position in the TSS region: | 87863355 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | U92436 |
|---|---|
| Distance: | 81 |
| Num_trans: | 5728 |
| All_trans: | HGNC:9588 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_001126049 |
| Entrez ID: | 100144748 |
| Nearest Unigene: | Hs.559820 |
| Nearest Refseq: | NM_001126049 |
| Nearest Ensembl: | ENSG00000227268 |
| Gene Name: | phosphatase and tensin homolog |
| Gene Alias: | CWS4|KILLIN |
| Gene Description: | killin, p53 regulated DNA replication inhibitor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
