Difference between revisions of "TSS:Hg 106145.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23442 |
|bA149I23.6= | |bA149I23.6= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=89378063 | |end=89378063 | ||
| + | |end_of_center_position=89378057 | ||
|entrez_id=439996 | |entrez_id=439996 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=IFIT1L | + | |gene_alias=IFIT1L{{!}}bA149I23.6 |
|gene_description=interferon induced protein with tetratricopeptide repeats 1B | |gene_description=interferon induced protein with tetratricopeptide repeats 1B | ||
|gene_id=439996 | |gene_id=439996 | ||
| Line 22: | Line 23: | ||
|nearest_refseq=NM_001010987 | |nearest_refseq=NM_001010987 | ||
|nearest_unigene=Hs.500491 | |nearest_unigene=Hs.500491 | ||
| − | |num_trans= | + | |num_trans=439996 |
|species=human | |species=human | ||
|start=89378049 | |start=89378049 | ||
| + | |start_of_center_position=89378056 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-35(CCATATATAAGC,+,0.00),-35(CCATATATAAGC,-,0.00) |
| − | |transcript_name=ENST00000371809 | + | |transcript_name=ENST00000371809.3 BX647300 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106145.1 | |tss_id=hg_106145.1 | ||
Latest revision as of 19:46, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89378056 |
|---|---|
| End of the center position in the TSS region: | 89378057 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371809.3 BX647300 |
|---|---|
| Distance: | 0 |
| Num_trans: | 439996 |
| All_trans: | HGNC:23442 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001010987 |
| Entrez ID: | 439996 |
| Nearest Unigene: | Hs.500491 |
| Nearest Refseq: | NM_001010987 |
| Nearest Ensembl: | ENSG00000204010 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 1B |
| Gene Alias: | IFIT1L|bA149I23.6 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 1B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CCATATATAAGC,+,0.00),-35(CCATATATAAGC,-,0.00) |
