Difference between revisions of "TSS:Hg 106204.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000614189.4 | + | |all_trans=ENST00000614189.4:145 NR_046435:145 NM_001257101:145 BC007377:151 BC051845:170 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=126 |
|distance_to_tss=-166 | |distance_to_tss=-166 | ||
|end=91162867 | |end=91162867 | ||
| + | |end_of_center_position=91162846 | ||
|entrez_id=84333 | |entrez_id=84333 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:28264 | |hgnc_mgi_id=HGNC:28264 | ||
|nearest_ensembl=ENSG00000180628 | |nearest_ensembl=ENSG00000180628 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001257101 |
|nearest_refseq=NM_032373 | |nearest_refseq=NM_032373 | ||
|nearest_unigene=Hs.500512 | |nearest_unigene=Hs.500512 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=91162824 | |start=91162824 | ||
| + | |start_of_center_position=91162845 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001257101.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106204.1 | |tss_id=hg_106204.1 | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91162845 |
|---|---|
| End of the center position in the TSS region: | 91162846 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001257101.2 |
|---|---|
| Distance: | 126 |
| Num_trans: | 5 |
| All_trans: | ENST00000614189.4:145 NR_046435:145 NM_001257101:145 BC007377:151 BC051845:170 |
TATA-Box annotation
| Distance to TSS: | -166 |
|---|---|
| Nearest PromoterID: | NM_001257101 |
| Entrez ID: | 84333 |
| Nearest Unigene: | Hs.500512 |
| Nearest Refseq: | NM_032373 |
| Nearest Ensembl: | ENSG00000180628 |
| Gene Name: | polycomb group ring finger 5 |
| Gene Alias: | RNF159 |
| Gene Description: | polycomb group ring finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
