Difference between revisions of "TSS:Hg 106221.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26736 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=89 | |distance_to_tss=89 | ||
|end=91410423 | |end=91410423 | ||
| + | |end_of_center_position=91410374 | ||
|entrez_id=143279 | |entrez_id=143279 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:26736 | |hgnc_mgi_id=HGNC:26736 | ||
|nearest_ensembl=ENSG00000165338 | |nearest_ensembl=ENSG00000165338 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_145526 |
|nearest_refseq=NM_173497 | |nearest_refseq=NM_173497 | ||
|nearest_unigene=Hs.596096 | |nearest_unigene=Hs.596096 | ||
| − | |num_trans= | + | |num_trans=143279 |
|species=human | |species=human | ||
|start=91410324 | |start=91410324 | ||
| + | |start_of_center_position=91410373 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000371681.8 ENST00000298068. | + | |transcript_name=ENST00000371681.8 ENST00000298068.10 AK295723 AK094625 BC040187 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106221.1 | |tss_id=hg_106221.1 | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91410373 |
|---|---|
| End of the center position in the TSS region: | 91410374 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371681.8 ENST00000298068.10 AK295723 AK094625 BC040187 |
|---|---|
| Distance: | 0 |
| Num_trans: | 143279 |
| All_trans: | HGNC:26736 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NR_145526 |
| Entrez ID: | 143279 |
| Nearest Unigene: | Hs.596096 |
| Nearest Refseq: | NM_173497 |
| Nearest Ensembl: | ENSG00000165338 |
| Gene Name: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Alias: | - |
| Gene Description: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
