Difference between revisions of "TSS:Hg 106224.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 6: | Line 6: | ||
|TANK2= | |TANK2= | ||
|TNKL= | |TNKL= | ||
| − | |all_trans= | + | |all_trans=HGNC:15677 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=14 |
|end=91798477 | |end=91798477 | ||
| + | |end_of_center_position=91798441 | ||
|entrez_id=80351 | |entrez_id=80351 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=ARTD6 | + | |gene_alias=ARTD6{{!}}PARP-5b{{!}}PARP-5c{{!}}PARP5B{{!}}PARP5C{{!}}TANK2{{!}}TNKL{{!}}pART6 |
|gene_description=tankyrase 2 | |gene_description=tankyrase 2 | ||
|gene_id=80351 | |gene_id=80351 | ||
| Line 20: | Line 21: | ||
|gene_source=HGNC:15677 | |gene_source=HGNC:15677 | ||
|gene_symbol=TNKS2 | |gene_symbol=TNKS2 | ||
| − | |gene_synonyms=PARP-5b PARP-5c PARP5B PARP5C TANK2 TNKL pART6 | + | |gene_synonyms=ARTD6 PARP-5b PARP-5c PARP5B PARP5C TANK2 TNKL pART6 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:15677 | |hgnc_mgi_id=HGNC:15677 | ||
| Line 27: | Line 28: | ||
|nearest_refseq=NM_025235 | |nearest_refseq=NM_025235 | ||
|nearest_unigene=Hs.329327 | |nearest_unigene=Hs.329327 | ||
| − | |num_trans= | + | |num_trans=80351 |
|pART6= | |pART6= | ||
|species=human | |species=human | ||
|start=91798403 | |start=91798403 | ||
| + | |start_of_center_position=91798440 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK314612 AF309033 | + | |transcript_name=ENST00000371627.5 AK314612 AF309033 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106224.1 | |tss_id=hg_106224.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9H2K2 |
}} | }} | ||
Latest revision as of 19:48, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91798440 |
|---|---|
| End of the center position in the TSS region: | 91798441 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371627.5 AK314612 AF309033 |
|---|---|
| Distance: | 0 |
| Num_trans: | 80351 |
| All_trans: | HGNC:15677 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_025235 |
| Entrez ID: | 80351 |
| Nearest Unigene: | Hs.329327 |
| Nearest Refseq: | NM_025235 |
| Nearest Ensembl: | ENSG00000107854 |
| Gene Name: | tankyrase 2 |
| Gene Alias: | ARTD6|PARP-5b|PARP-5c|PARP5B|PARP5C|TANK2|TNKL|pART6 |
| Gene Description: | tankyrase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
