Difference between revisions of "TSS:Mm 161006.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Ever2= |
| + | |all_trans=MGI:2669037 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=227 | |distance_to_tss=227 | ||
|end=117782885 | |end=117782885 | ||
| + | |end_of_center_position=117782885 | ||
|entrez_id=217356 | |entrez_id=217356 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias=EVIN2 | + | |gene_alias=EVIN2{{!}}Ever2{{!}}mFLJ00400 |
|gene_description=transmembrane channel-like gene family 8 | |gene_description=transmembrane channel-like gene family 8 | ||
|gene_id=217356 | |gene_id=217356 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2669037 | |hgnc_mgi_id=MGI:2669037 | ||
| + | |mFLJ00400= | ||
|nearest_ensembl=ENSMUSG00000050106 | |nearest_ensembl=ENSMUSG00000050106 | ||
|nearest_promoter_id=NM_001195088 | |nearest_promoter_id=NM_001195088 | ||
|nearest_refseq=NM_181856 | |nearest_refseq=NM_181856 | ||
|nearest_unigene=Mm.116675 | |nearest_unigene=Mm.116675 | ||
| − | |num_trans= | + | |num_trans=217356 |
|species=mouse | |species=mouse | ||
|start=117782884 | |start=117782884 | ||
| + | |start_of_center_position=117782884 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AY263160 | |transcript_name=AY263160 | ||
Latest revision as of 08:51, 27 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 117782884 |
|---|---|
| End of the center position in the TSS region: | 117782885 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY263160 |
|---|---|
| Distance: | 165 |
| Num_trans: | 217356 |
| All_trans: | MGI:2669037 |
TATA-Box annotation
| Distance to TSS: | 227 |
|---|---|
| Nearest PromoterID: | NM_001195088 |
| Entrez ID: | 217356 |
| Nearest Unigene: | Mm.116675 |
| Nearest Refseq: | NM_181856 |
| Nearest Ensembl: | ENSMUSG00000050106 |
| Gene Name: | transmembrane channel-like gene family 8 |
| Gene Alias: | EVIN2|Ever2|mFLJ00400 |
| Gene Description: | transmembrane channel-like gene family 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
