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Difference between revisions of "TSS:Mm 163005.1"

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(Created page with "{{TSSDetail |all_trans=ENSMUST00000137815.1:0 AK220048:7 BC020132:-10 AK076160:-26 AK152108:-26 AK166097:-26 AK168194:-26 AK149856:-26 AK160216:-26 ENSMUST00000018992.3:-30 AK...")
 
 
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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000137815.1:0 AK220048:7 BC020132:-10 AK076160:-26 AK152108:-26 AK166097:-26 AK168194:-26 AK149856:-26 AK160216:-26 ENSMUST00000018992.3:-30 AK011383:-30 NM_025936:-52 uc007ilh.2:-52
+
|2610037E21Rik=
 +
|AL033339=
 +
|AW985894=
 +
|all_trans=MGI:1914297
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 6: Line 9:
 
|distance_to_tss=61
 
|distance_to_tss=61
 
|end=35834476
 
|end=35834476
 +
|end_of_center_position=35834467
 
|entrez_id=104458
 
|entrez_id=104458
 
|gc_percent=0.661692
 
|gc_percent=0.661692
|gene_alias=2610011N19Rik|2610037E21Rik|AL033339|AW985894
+
|gene_alias=2610011N19Rik{{!}}2610037E21Rik{{!}}AL033339{{!}}AW985894
 
|gene_description=arginyl-tRNA synthetase
 
|gene_description=arginyl-tRNA synthetase
 
|gene_id=104458
 
|gene_id=104458
Line 21: Line 25:
 
|nearest_refseq=NM_025936
 
|nearest_refseq=NM_025936
 
|nearest_unigene=Mm.284906
 
|nearest_unigene=Mm.284906
|num_trans=13
+
|num_trans=104458
 
|species=mouse
 
|species=mouse
 
|start=35834457
 
|start=35834457
 +
|start_of_center_position=35834466
 
|strand=-
 
|strand=-
 
|transcript_name=ENSMUST00000137815.1
 
|transcript_name=ENSMUST00000137815.1

Latest revision as of 09:35, 27 July 2021

Basic information about the TSS


TSS ID:mm_163005.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:35834457
End:35834476
Strand:-
TSS Score:1
Start of the center position in the TSS region:35834466
End of the center position in the TSS region:35834467



Gene and protein annotation


Transcript_name:ENSMUST00000137815.1
Distance:0
GeneID:104458
HGNC/MGI_ID:MGI:1914297
UniProt_ID:
Gene_name:arginyl-tRNA synthetase
Gene_symbol:Rars
Gene_synonyms:2610011N19Rik 2610037E21Rik
Gene_source:MGI:1914297



Transcript annotation


Transcript_name:ENSMUST00000137815.1
Distance:0
Num_trans:104458
All_trans:MGI:1914297



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_025936
Entrez ID:104458
Nearest Unigene:Mm.284906
Nearest Refseq:NM_025936
Nearest Ensembl:ENSMUSG00000018848
Gene Name:arginyl-tRNA synthetase
Gene Alias:2610011N19Rik|2610037E21Rik|AL033339|AW985894
Gene Description:arginyl-tRNA synthetase
Gene Type:protein-coding
CpG%:0.095
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):