Difference between revisions of "TSS:Hg 106605.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-2851 |
|end=100742736 | |end=100742736 | ||
| + | |end_of_center_position=100742732 | ||
|entrez_id=5076 | |entrez_id=5076 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=FSGS7 | + | |gene_alias=FSGS7{{!}}PAPRS |
|gene_description=paired box 2 | |gene_description=paired box 2 | ||
|gene_name=PAX2 | |gene_name=PAX2 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=100742726 | |start=100742726 | ||
| + | |start_of_center_position=100742731 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-5(TCATTTAGAGGC,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:41, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 100742731 |
|---|---|
| End of the center position in the TSS region: | 100742732 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -2851 |
|---|---|
| Nearest PromoterID: | NM_003988 |
| Entrez ID: | 5076 |
| Nearest Unigene: | Hs.155644 |
| Nearest Refseq: | NM_000278 |
| Nearest Ensembl: | ENSG00000075891 |
| Gene Name: | PAX2 |
| Gene Alias: | FSGS7|PAPRS |
| Gene Description: | paired box 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -5(TCATTTAGAGGC,+,0.00) |
