Difference between revisions of "TSS:Hg 106613.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PAPRS= | |PAPRS= | ||
| − | |all_trans= | + | |all_trans=HGNC:8616 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 7: | Line 7: | ||
|distance_to_tss=204 | |distance_to_tss=204 | ||
|end=100745932 | |end=100745932 | ||
| + | |end_of_center_position=100745916 | ||
|entrez_id=5076 | |entrez_id=5076 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
| − | |gene_alias=FSGS7 | + | |gene_alias=FSGS7{{!}}PAPRS |
|gene_description=paired box 2 | |gene_description=paired box 2 | ||
|gene_id=5076 | |gene_id=5076 | ||
| Line 19: | Line 20: | ||
|hgnc_mgi_id=HGNC:8616 | |hgnc_mgi_id=HGNC:8616 | ||
|nearest_ensembl=ENSG00000075891 | |nearest_ensembl=ENSG00000075891 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_003987 |
|nearest_refseq=NM_000278 | |nearest_refseq=NM_000278 | ||
|nearest_unigene=Hs.155644 | |nearest_unigene=Hs.155644 | ||
| − | |num_trans= | + | |num_trans=5076 |
|species=human | |species=human | ||
|start=100745898 | |start=100745898 | ||
| + | |start_of_center_position=100745915 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000370296.6 ENST00000428433.5 L25597 M89470 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106613.1 | |tss_id=hg_106613.1 | ||
Latest revision as of 19:57, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 100745915 |
|---|---|
| End of the center position in the TSS region: | 100745916 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000370296.6 ENST00000428433.5 L25597 M89470 |
|---|---|
| Distance: | -188 |
| Num_trans: | 5076 |
| All_trans: | HGNC:8616 |
TATA-Box annotation
| Distance to TSS: | 204 |
|---|---|
| Nearest PromoterID: | NM_003987 |
| Entrez ID: | 5076 |
| Nearest Unigene: | Hs.155644 |
| Nearest Refseq: | NM_000278 |
| Nearest Ensembl: | ENSG00000075891 |
| Gene Name: | paired box 2 |
| Gene Alias: | FSGS7|PAPRS |
| Gene Description: | paired box 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
